other:Article Title: A Cancer-Specific Antigen Drives Histone Acetylation by Stabilizing the Acetyltransferases
Article Snippet: Anti-MAGE-A10 (Cell Signaling Technology, 68978), anti-GCN5L2 (Cell Signaling Technology, 3305), anti-PCAF (Cell Signaling Technology, 3378), anti-Ubiquitin (Cell Signaling Technology, 20326), anti-Histone H3 (Abcam, ab1791), anti-Histone H3K9 (Abcam, ab4441), anti-Histone H3K14 (Abcam, ab52946), anti-HA tag (Abcam, ab9110), anti-SQSTM1/p62 (Abcam, ab56416), anti-LC3A/B (Abcam, ab62721), anti-CDT2/RAMP (Abcam, ab72264), anti-DDB1 (Abcam, ab109027), anti-LC3 (MBL, M152-3), anti-GCN5L2 (Sigma, SAB1403858), anti-CUL4A (Proteintech, 10693), anti-DDDDK-tag (ABclonal, AE063), anti-MYC-Tag (ABclonal, AE070), anti-His-tag (ABclonal, AE086), anti-c-Myc (ABclonal, A19032), anti-β-Tubulin (ABclonal, A12289), anti-GAPDH (ABclonal, AC002).
Article Title: Dynamic regulation of mRNA acetylation at synapses by learning and memory
Article Snippet: The following primary antibodies were used: anti-H3 (1:1000, Cell Signaling, 9715), anti-SYN1 (1:1000, Cell Signaling, 2312), anti-α-tubulin (1:10000, Cell Signaling, 3873), rabbit anti-NAT10 (1:1000, Abcam, ab194297), anti-Acetyl-Histone H3 (1:1000, Cell Signaling, 9649), anti-Arc (1:1000, Proteintech, 66550-1-Ig), anti-PSD95 (1:1000, Cell Signaling, 3450), anti-PCAF (1:1000, Cell Signaling, 3378), and rabbit anti-GAPDH (1:5000, Abways, ab0037).
Article Title: Dynamic regulation of mRNA acetylation at synapses by spatial memory in mouse hippocampus
Article Snippet: DOI: https://doi.org/10.7554/eLife.108995 20 of 32 3873), anti- NAT10 (1:1000, Abcam, ab194297), anti- Acetyl- Histone H3 (1:1000, Cell Signaling, 9649), anti- ARC (1:1000, Proteintech, 66550- 1- Ig), anti- PSD95 (1:1000, Cell Signaling, 3450), anti- PCAF (1:1000, Cell Signaling, 3378), and anti- GAPDH (1:5000, Abways, ab0037).
Article Title: Dynamic regulation of mRNA acetylation at synapses by spatial memory in mouse hippocampus
Article Snippet: The following primary antibodies were used: anti-Histone H3 (1:1000, Cell Signaling, 9715), anti-SYN1 (1:1000, Cell Signaling, 2312), anti-α-tubulin (1:10,000, Cell Signaling, 3873), anti-NAT10 (1:1000, Abcam, ab194297), anti-Acetyl-Histone H3 (1:1000, Cell Signaling, 9649), anti-ARC (1:1000, Proteintech, 66550-1-Ig), anti-PSD95 (1:1000, Cell Signaling, 3450), anti-PCAF (1:1000, Cell Signaling, 3378), and anti-GAPDH (1:5000, Abways, ab0037).
Western Blot:Article Title: The SAGA acetyltransferase module is required for the maintenance of MAF and MYC oncogenic gene expression programs in multiple myeloma
Article Snippet: Protein samples were resolved by SDS-PAGE on 4%–12% Nu-Page gels (Life Technologies) and transferred to PVDF membranes. .. The following antibodies were used: anti-ADA2B (1:1000 [Abcam discontinued] or 1:500 [Santa Cruz Biotechnology sc-130479,]), anti-GCN5L2 (1:1000; Cell Signaling Technology 3305), anti-PCAF (1:1000; Cell Signaling Technology 3378), anti-ADA1 (1:2000; Proteintech 20337-1-AP), anti-USP22 (1:2000; Abcam ab235923), anti-MYC (1:1000; Cell Signaling Technology 9402), anti-MAF (1:1000; Abcam ab243901), anti-E2F1 (1:1000; Santa Cruz Biotechnology sc-251), anti-DP1 (1:1000; Santa Cruz Biotechnology sc-53642), anti-IRF4 (1:500; Santa Cruz Biotechnology sc-48338), anti-TAF8 (1:100; Abcam ab204894), anti-H3K9ac (1:1000; Abcam ab32129), anti-H3 (1:20,000; Abcam ab1791), anti-GAPDH (1:10,000; Millipore Sigma MAB374), anti-β-Tubulin (1:1000; Cell Signaling Technology 2146), anti-HA (1:1000; Cell Signaling Technology 3724), apoptosis Western blot cocktail (1:250; Abcam ab136812), and secondary horseradish peroxidase (HRP)-conjugated antibodies (1:8000; Cytiva mouse IgG [NA931] or rabbit IgG [NA934]). .. Amersham ECL Prime Western blotting detection reagent (GE Healthcare) was used for chemiluminescent protein detection.
Control:Article Title: PCAF promotes R-loop resolution via histone acetylation.
Article Snippet: .. Primary antibodies used in this study were Anti-S9.6 (Kerafest, #ENH001); Anti-ssDNA (Millipore, #MAB3034); AntiNucleolin (Abcam, #ab50279); Anti-PCAF (Cell Signaling, #3378); Anti-H4K8ac (Millipore, #07-328); Anti-MRE11 (Novus Biologicals, #NB100-142); Anti-EXO1 (Genetex, #GTX109891); Anti-FANCM (Cell Signaling, #57697); AntiBLM (Abcam, #ab2179); Anti-GFP (Abcam, #ab290); AntimCherry (Abcam, #ab167453); Anti-Flag (Sigma-Aldrich, #F1804; Millipore, #F7425), Anti- β-actin (Sigma-Aldrich, #A5441); Anti-mouse IgG isotype control (Santa-Cruz, #sc2025). .. Secondary antibodies used were anti-mouse HRP (Cell Signaling, #7076), anti-rabbit HRP (Cell Signaling, #7074), Alexa Fluor 488 goat anti-mouse IgG (Invitrogen, #A11029), Alexa Fluor 594 goat anti-mouse IgG (Invitrogen, # # # W S e t 1 i s i i r t H R S a T d k B o a s t m q d S w N a fl c I C 2 C i h b b s w L ( s t G i T ( H ( w t D ow nloaded from https://academ ic.oup.com /nar/advance-article/doi/10.1093/nar/gkae558/7699953 by guest on 06 July 2024 A11032), Alexa Fluor 488 goat anti-rabbit IgG (Invitrogen, A11034), Alexa Fluor 594 goat anti-rabbit IgG (Invitrogen, A11037). estern blotting amples were subjected to electrophoresis on an 8–16% gradint SDS-PAGE gel for 90 min (120 V) and were subsequently ransferred onto a nitrocellulose membrane (Cytiva) for 2 h at 00V.
Article Title: PCAF promotes R-loop resolution via histone acetylation
Article Snippet: .. Primary antibodies used in this study were Anti-S9.6 (Kerafest, #ENH001); Anti-ssDNA (Millipore, #MAB3034); Anti-Nucleolin (Abcam, #ab50279); Anti-PCAF (Cell Signaling, #3378); Anti-H4K8ac (Millipore, #07-328); Anti-MRE11 (Novus Biologicals, #NB100-142); Anti-EXO1 (Genetex, #GTX109891); Anti-FANCM (Cell Signaling, #57697); Anti-BLM (Abcam, #ab2179); Anti-GFP (Abcam, #ab290); Anti-mCherry (Abcam, #ab167453); Anti-Flag (Sigma-Aldrich, #F1804; Millipore, #F7425), Anti-β-actin (Sigma-Aldrich, #A5441); Anti-mouse IgG isotype control (Santa-Cruz, #sc-2025). .. Secondary antibodies used were anti-mouse HRP (Cell Signaling, #7076), anti-rabbit HRP (Cell Signaling, #7074), Alexa Fluor 488 goat anti-mouse IgG (Invitrogen, #A11029), Alexa Fluor 594 goat anti-mouse IgG (Invitrogen, #A11032), Alexa Fluor 488 goat anti-rabbit IgG (Invitrogen, #A11034), Alexa Fluor 594 goat anti-rabbit IgG (Invitrogen, #A11037).
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